BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F10SP1|AL429937
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 1640 0.0
>3x_Contig1782
Length = 24703
Score = 1640 bits (826), Expect = 0.0
Identities = 828/830 (99%)
Strand = Plus / Minus
Query: 1 atcaagttttgatcaatgaacactgttcgaaacagtaacgaagattgtttgacaatcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20933 atcaagttttgatcaatgaacactgttcgaaacagtaacgaagattgtttgacaatcaag 20874
Query: 61 caccgaaagaggaaaaagaattgaaatacgtattgatgtttcgaactttcacaatactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20873 caccgaaagaggaaaaagaattgaaatacgtattgatgtttcgaactttcacaatactaa 20814
Query: 121 tctttagtgaataatacattggtccaattagtcatttgactttattggacgtaatcggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20813 tctttagtgaataatacattggtccaattagtcatttgactttattggacgtaatcggta 20754
Query: 181 aaaaawagagcaaagcggtgttgcaaatggtcgagcaccattttagcaaccctctcgtgg 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20753 aaaaatagagcaaagcggtgttgcaaatggtcgagcaccattttagcaaccctctcgtgg 20694
Query: 241 gtatcatttagtggagaaaaaagcaagaacagaatacaagatcggtgaatcaaattttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20693 gtatcatttagtggagaaaaaagcaagaacagaatacaagatcggtgaatcaaattttac 20634
Query: 301 cattacaagtcattccaacctaatgagttttctgtggcaattggtttcgaaattttcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20633 cattacaagtcattccaacctaatgagttttctgtggcaattggtttcgaaattttcaaa 20574
Query: 361 ctagatgtctttgttgaaagttgaggttgtttttccccattatttgcgacagaagcagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20573 ctagatgtctttgttgaaagttgaggttgtttttccccattatttgcgacagaagcagca 20514
Query: 421 tcttcagggtaatcgctgtaagtgttataatcaatccagttattaatcttagcacttggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20513 tcttcagggtaatcgctgtaagtgttataatcaatccagttattaatcttagcacttggg 20454
Query: 481 ctgattgacacctggtcgtcgttcataacgttacctttttcaacaactggattaaaatcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20453 ctgattgacacctggtcgtcgttcataacgttacctttttcaacaactggattaaaatcg 20394
Query: 541 aacgaagattcgtaatcataactgtcgtaagaatgttggtcatctagatttggattagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20393 aacgaagattcgtaatcataactgtcgtaagaatgttggtcatctagatttggattagct 20334
Query: 601 tgaagttgcttcttcttgtttctaattctcactgcaagtaagcagatgcaaaccaaggct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20333 tgaagttgcttcttcttgtttctaattctcactgcaagtaagcagatgcaaaccaaggct 20274
Query: 661 atcaagaaaccaccgacaatggaaccaaccagaattccgatggtcttcccgttcgtacct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20273 atcaagaaaccaccgacaatggaaccaaccagaattccgatggtcttcccgttcgtacct 20214
Query: 721 gtagaagatttgcttgaactactagaggaatagttgcttgatcctgggttgtagttttga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20213 gtagaagatttgcttgaactactagaggaatagttgcttgatcctgggttgtagttttga 20154
Query: 781 tcgtctaaggaacccaagttaattgcactgccgcygctcgacttctcttt 830
|||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 20153 tcgtctaaggaacccaagttaattgcactgccgctgctcgacttctcttt 20104
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6645
Number of Sequences: 1807
Number of extensions: 6645
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)